Search results for "Regular Article"

showing 10 items of 102 documents

The Search for Common Origin: Homology Revisited

2018

Understanding the evolution of biodiversity on Earth is a central aim in biology. Currently, various disciplines of science contribute to unravel evolution at all levels of life, from individual organisms to species and higher ranks, using different approaches and specific terminologies. The search for common origin, traditionally called homology, is a connecting paradigm of all studies related to evolution. However, it is not always sufficiently taken into account that defining homology depends on the hierarchical level studied (organism, population, and species), which can cause confusion. Therefore, we propose a framework to define homologies making use of existing terms, which refer to …

0106 biological sciences0301 basic medicineGENESAnalogyPopulationAnalogyBiology010603 evolutionary biology01 natural sciencesHomology (biology)03 medical and health sciencesGeneticsmedicinegenealogyeducationparalogyEcology Evolution Behavior and SystematicsOrganismHOMEOSISConfusioneducation.field_of_studyEvolutionary BiologyScience & TechnologyPhylogenetic treeCHARACTERhomoplasyhomologyClassificationCommon ancestryBiological EvolutionEVOLUTIONcharacter030104 developmental biologyEvolutionary biologyHorizontal gene transfermedicine.symptomorthologyLife Sciences & BiomedicineRegular Articlescommon ancestryDEEP HOMOLOGY
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Can Deliberately Incomplete Gene Sample Augmentation Improve a Phylogeny Estimate for the Advanced Moths and Butterflies (Hexapoda: Lepidoptera)?

2011

Abstract This paper addresses the question of whether one can economically improve the robustness of a molecular phylogeny estimate by increasing gene sampling in only a subset of taxa, without having the analysis invalidated by artifacts arising from large blocks of missing data. Our case study stems from an ongoing effort to resolve poorly understood deeper relationships in the large clade Ditrysia ( > 150,000 species) of the insect order Lepidoptera (butterflies and moths). Seeking to remedy the overall weak support for deeper divergences in an initial study based on five nuclear genes (6.6 kb) in 123 exemplars, we nearly tripled the total gene sample (to 26 genes, 18.4 kb) but only in a…

0106 biological sciencesNonsynonymous substitutionNuclear genetaxon samplingStatistics as TopicGenes Insect010603 evolutionary biology01 natural sciencesmolecular phylogeneticsGenetic Heterogeneitymissing data03 medical and health sciencesDitrysiaGeneticsAnimalsGelechioideaPhylogenyEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health sciencesbiologyNucleotidesHexapodaClassificationnuclear genesbiology.organism_classificationMissing dataLepidopteragene samplingTaxonMacrolepidopteraEvolutionary biologyMolecular phylogeneticsDitrysiaRegular ArticlesSystematic Biology
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Models for preterm cortical development using non invasive clinical EEG

2017

AbstractThe objective of this study was to evaluate the piglet and the mouse as model systems for preterm cortical development. According to the clinical context, we used non invasive EEG recordings. As a prerequisite, we developed miniaturized Ag/AgCl electrodes for full band EEG recordings in mice and verified that Urethane had no effect on EEG band power. Since mice are born with a “preterm” brain, we evaluated three age groups: P0/P1, P3/P4 and P13/P14. Our aim was to identify EEG patterns in the somatosensory cortex which are distinguishable between developmental stages and represent a physiologic brain development. In mice, we were able to find clear differences between age groups wit…

0301 basic medicineBrain developmentsomatosensory cortexmouse modelContext (language use)Neurosciences. Biological psychiatry. NeuropsychiatryBiologyElectroencephalographySomatosensory system600 Technik Medizin angewandte Wissenschaften::610 Medizin und Gesundheit::616 KrankheitenInterhemispheric coherence03 medical and health sciences0302 clinical medicine616medicineCoherence (signal processing)cortical developmentmedicine.diagnostic_testGeneral Neurosciencephase amplitude couplingNon invasivetelemetrycoherence030104 developmental biologypigletfull band eegpretermNeuroscience030217 neurology & neurosurgeryPhase amplitude couplingRegular ArticlesRC321-571Translational Neuroscience
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Macrophage type modulates osteogenic differentiation of adipose tissue MSCs

2017

Since the reconstruction of large bone defects remains a challenge, knowledge about the biology of bone healing is desirable to develop novel strategies for improving the treatment of bone defects. In osteoimmunology, macrophages are the central component in the early stage of physiological response after bone injury and bone remodeling in the late stage. During this process, a switch of macrophage phenotype from pro-inflammatory (M1) to anti-inflammatory (M2) is observed. An appealing option for bone regeneration would be to exploit this regulatory role for the benefit of osteogenic differentiation of osteoprogenitor cells (e.g., mesenchymal stem cells; MSCs) and to eventually utilize this…

0301 basic medicineHistologyMacrophageOsteoimmunologyAdipose tissueBone healingCell CommunicationBiologyBone morphogenetic protein 2Bone remodelingCell LinePathology and Forensic MedicineMSC03 medical and health sciencesCalcification PhysiologicAll institutes and research themes of the Radboud University Medical CenterOsteogenesisOsteogenic differentiationHumansBone regenerationCell ProliferationBone InjuryMacrophagesMesenchymal stem cellCell PolarityCell DifferentiationMesenchymal Stem CellsRegular ArticleCell BiologyAlkaline PhosphataseCoculture TechniquesCell biology030104 developmental biologyReconstructive and regenerative medicine Radboud Institute for Molecular Life Sciences [Radboudumc 10]Adipose TissueGene Expression RegulationCell culture modelImmunologyCytokinesBiomarkersCell and Tissue Research
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Measurement of the W boson mass

1996

The W boson mass is measured using proton-proton collision data at root s = 13 TeV corresponding to an integrated luminosity of 1.7fb(-1) recorded during 2016 by the LHCb experiment. With a simultaneous fit of the muon q/p(T) distribution of a sample of W ->mu y decays and the phi* distribution of a sample of Z -> mu mu decays the W boson mass is determined to be

13000 GeV-cmsTevatronparton: distribution functionQC770-798W: leptonic decay7. Clean energy01 natural sciencesLuminosityPhysics Particles & FieldsSubatomär fysikHadron-Hadron scattering (experiments)scattering [p p]Electroweak interactionNuclear Experimentparticle identification [muon]Settore FIS/01PhilosophyPhysicsCoupling (probability)CERN LHC CollHadron colliderPhysical SciencesTransverse masscolliding beams [p p]distribution function [parton]Collider Detector at FermilabParticles and fieldCOLLISIONSp p: scatteringCERN PBARP COLLIDERAstrophysics::High Energy Astrophysical PhenomenaW: mass: measuredStandard ModelNuclear physicsddc:530010306 general physics0206 Quantum PhysicsMuonScience & Technology010308 nuclear & particles physicsWeinberg angleHEPFERMILAB TEVATRONElectroweak interaction Hadron-Hadron scattering (experiments) QCD For- ward physicsCDFp p: colliding beamsPhysics::Instrumentation and DetectorsElectron–positron annihilation= 1.8 TEVGeneral Physics and Astronomy= 1.8 TEV; PBARP COLLISIONS; DECAYVector bosonHigh Energy Physics - ExperimentHigh Energy Physics - Experiment (hep-ex)Computer Science::Systems and ControlSubatomic Physics[PHYS.HEXP]Physics [physics]/High Energy Physics - Experiment [hep-ex]PhysicFermilabBosonPhysics0105 Mathematical PhysicsStatistics::ApplicationsSettore FIS/01 - Fisica Sperimentalestatistical [error]Nuclear & Particles PhysicsCENTRAL TRACKING CHAMBERerror: statisticalCENTRAL ELECTROMAGNETIC CALORIMETERTransverse momentum0202 Atomic Molecular Nuclear Particle and Plasma PhysicsLHCmass: measured [W]Particle Physics - ExperimentStatistics::TheoryParticle physicsNuclear and High Energy Physicselectroweak interaction: precision measurementRegular Article - Experimental PhysicsTRANSVERSE ENERGYFOS: Physical sciencesmuon: particle identification530Particle decayPBARP COLLISIONSNuclear and particle physics. Atomic energy. Radioactivityprecision measurement [electroweak interaction]0103 physical sciencesForward physicVECTOR BOSONElectroweak interaction Hadron-Hadron scattering (experiments) QCD Forward physicsCERN PBARP COLLIDER; CENTRAL ELECTROMAGNETIC CALORIMETER; CENTRAL TRACKING CHAMBER; = 1.8 TEV; PARTON DISTRIBUTIONS; FERMILAB TEVATRON; VECTOR BOSON; TRANSVERSE ENERGY; CDF; COLLISIONShep-exHigh Energy Physics::PhenomenologyLHC-BQCDleptonic decay [W]LHCbPARTON DISTRIBUTIONSMass spectrumForward physicsPhysics::Accelerator PhysicsHigh Energy Physics::ExperimentDECAYHumanitiesexperimental results
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Random resampling numerical simulations applied to a SEIR compartmental model

2021

AbstractIn this paper, we apply resampling techniques to a modified compartmental SEIR model which takes into account the existence of undetected infected people in an epidemic. In particular, we implement numerical simulations for the evolution of the first wave of the COVID-19 pandemic in Spain in 2020. We show, by using suitable measures of goodness, that the point estimates obtained by the bootstrap samples improve the ones of the original data. For example, the relative error of detected currently infected people is equal to 0.061 for the initial estimates, while it is reduced to 0.0538 for the mean over all bootstrap estimated series.

2019-20 coronavirus outbreakSeries (mathematics)Coronavirus disease 2019 (COVID-19)Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)General Physics and AstronomyRegular ArticleSalut públicaOriginal dataApproximation errorResamplingApplied mathematicsPoint estimationEconomia de la salutMathematics
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Energy dependence of the transverse momentum distributions of charged particles in pp collisions measured by ALICE

2013

Differential cross sections of charged particles in inelastic pp collisions as a function of $p_{\rm T}$ have been measured at $\sqrt{s}=$ 0.9, 2.76 and 7 TeV at the LHC. The $p_{\rm T}$ spectra are compared to NLO-pQCD calculations. Though the differential cross section for an individual $\sqrt{s}$ cannot be described by NLO-pQCD, the relative increase of cross section with $\sqrt{s}$ is in agreement with NLO-pQCD. Based on these measurements and observations, procedures are discussed to construct pp reference spectra at $\sqrt{s} =$ 2.76 and 5.02 TeV up to $p_{\rm T}$ = 50 GeV/$c$ as required for the calculation of the nuclear modification factor in nucleus-nucleus and proton-nucleus coll…

:Kjerne- og elementærpartikkelfysikk: 431 [VDP]Physics and Astronomy (miscellaneous)heavy ion collisionsNuclear Theory01 natural sciences7. Clean energySpectral lineHigh Energy Physics - ExperimentHigh Energy Physics - Experiment (hep-ex)pp collisionALICEpp collisions; transverse momentum; ALICE[PHYS.HEXP]Physics [physics]/High Energy Physics - Experiment [hep-ex]Nuclear Experiment (nucl-ex)transverse momentum distributionNuclear ExperimentNuclear ExperimentPhysicsLarge Hadron Collidertransverse momentum; pp; ALICE; charged particlesPhysicsCharged particle3. Good health:Mathematics and natural scienses: 400::Physics: 430::Nuclear and elementary particle physics: 431 [VDP]:Nuclear and elementary particle physics: 431 [VDP]Transverse momentumLhcDiffractionpp collisionsParticle Physics - ExperimentRegular Article - Experimental PhysicsVDP::Matematikk og naturvitenskap: 400::Fysikk: 430::Kjerne- og elementærpartikkelfysikk: 431particle productionFOS: Physical sciences[PHYS.NEXP]Physics [physics]/Nuclear Experiment [nucl-ex]transverse momentumtransverse momentum distribution; PP COLLISIONSNuclear physicsRoot-S(Nn)=2.76 TevCross section (physics)0103 physical sciencesNuclear Physics - ExperimentPb-Pb Collisions010306 general physicsEngineering (miscellaneous)SuppressionALICE experiment; particle production; heavy ion collisionsVDP::Mathematics and natural scienses: 400::Physics: 430::Nuclear and elementary particle physics: 431010308 nuclear & particles physicsHigh Energy Physics::PhenomenologyTransverse momentum distributions:Matematikk og naturvitenskap: 400::Fysikk: 430::Kjerne- og elementærpartikkelfysikk: 431 [VDP]ALICE experimentFunction (mathematics)Proton-Proton Collisionsp-p collisionHigh Energy Physics::ExperimentALICE (propellant)Energy (signal processing)
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3D microvascular architecture of pre-cancerous lesions and invasive carcinomas of the colon.

2001

Despite the significance of tumour neoangiogenesis and the extensive knowledge on the molecular basis of blood vessel formation currently no quantitative data exist on the 3D microvascular architecture in human primary tumours and their precursor lesions. This prompted us to examine the 3D vascular network of normal colon mucosa, adenomas and invasive carcinomas by means of quantitative microvascular corrosion casting. Fresh hemicolectomy specimens from 20 patients undergoing cancer or polyposis coli surgery were used for corrosion casting, factor VIII and VEGF immunostaining. In addition, immunostaining was done on colorectal tissue from 33 patients with metastatic and non-metastatic carci…

AdenomaMaleVascular Endothelial Growth Factor ACancer ResearchPathologymedicine.medical_specialtytumour vascular architectureAdenomaAngiogenesisAdenomatous polyposis coliEndothelial Growth FactorsMetastasisNeovascularizationangiogenesisImage Processing Computer-AssistedMedicineHumansNeoplasm InvasivenessGrading (tumors)AgedLymphokinesbiologybusiness.industryVascular Endothelial Growth FactorsMicrocirculationCancerRegular ArticleMiddle Agedmedicine.diseasecolorectal adenocarcinomapre-cancerous lesionsOncologyAdenomatous Polyposis ColiColonic Neoplasmsbiology.proteinFemalemedicine.symptombusinessColorectal NeoplasmsPrecancerous ConditionsImmunostainingBritish journal of cancer
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Structural Covariance of Cortical Gyrification at Illness Onset in Treatment Resistance: A Longitudinal Study of First-Episode Psychoses

2021

AbstractTreatment resistance (TR) in patients with first-episode psychosis (FEP) is a major cause of disability and functional impairment, yet mechanisms underlying this severe disorder are poorly understood. As one view is that TR has neurodevelopmental roots, we investigated whether its emergence relates to disruptions in synchronized cortical maturation quantified using gyrification-based connectomes. Seventy patients with FEP evaluated at their first presentation to psychiatric services were followed up using clinical records for 4 years; of these, 17 (24.3%) met the definition of TR and 53 (75.7%) remained non-TR at 4 years. Structural MRI images were obtained within 5 weeks from first…

AdultAffective Disorders PsychoticMalePsychosisLongitudinal studymedicine.medical_specialtyAdolescentlongitudinalAcademicSubjects/MED00810treatment-resistantYoung Adult03 medical and health sciences0302 clinical medicineInternal medicinemedicineHumansLongitudinal Studiesfirst-episode psychosisGyrificationClozapineCerebral CortexFirst episodeclozapinebusiness.industryFunctional data analysisgyrificationmedicine.diseaseMagnetic Resonance Imaging030227 psychiatryschizophreniaPsychiatry and Mental healthPsychotic DisordersSchizophreniaConnectomeCardiologyFemaleNerve Netbusiness030217 neurology & neurosurgeryAntipsychotic AgentsFollow-Up StudiesRegular ArticlesMRImedicine.drugSchizophrenia Bulletin
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Daily use, especially of high-potency cannabis, drives the earlier onset of psychosis in cannabis users.

2013

UNLABELLED: Cannabis use is associated with an earlier age of onset of psychosis (AOP). However, the reasons for this remain debated. METHODS: We applied a Cox proportional hazards model to 410 first-episode psychosis patients to investigate the association between gender, patterns of cannabis use, and AOP. RESULTS: Patients with a history of cannabis use presented with their first episode of psychosis at a younger age (mean years = 28.2, SD = 8.0; median years = 27.1) than those who never used cannabis (mean years = 31.4, SD = 9.9; median years = 30.0; hazard ratio [HR] = 1.42; 95% CI: 1.16-1.74; P < .001). This association remained significant after controlling for gender (HR = 1.39; 95% …

AdultAffective Disorders PsychoticMaleRiskage of onset cannabis drug use gender high-potency cannabis psychotic disorders survival plotsPsychosisPediatricsmedicine.medical_specialtySex FactorsDelta-9-tetrahydrocannabinolSettore MED/48 -Scienze Infermierist. e Tecn. Neuro-Psichiatriche e Riabilitat.medicineHumansAge of OnsetPsychiatrySettore MED/25 - PsichiatriaCannabisFirst episodebiologyProportional hazards modelHazard ratioRegular Articlemedicine.diseasebiology.organism_classificationPsychiatry and Mental healthPsychotic DisordersSchizophreniaFemaleCannabisAge of onsetPsychologySchizophrenia bulletin
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